Work Experience

HPC Administrator (2016-present)，University of Connecticut, Storrs

• Provide assistance to the users of HPC cluster in resolving issues and managing support tickets
• System performance analysis and tuning; monitor, analyze, and correct system issues
• Build, install and support user requested software
• Create singularity image for kernel sensitive tools, such as tensorflow (CUDA-based version)
• Deploy the new hardware, such as computing nodes and clustered file system

Research Assistant (2014-present)，University of Connecticut, Storrs

• Design computational algorithm for complex genome analysis based on NGS sequencing data
• DNA/RNA sequence analysis in multi-research fields, such as SV deletion, circRNA and gap filling
• Build pipeline to process NGS data by using 3rd-party tools, such as BWA, SAMTools and Picard

R&D Director (2011-2014), Software Engineer (2009 - 2014), Todaysoft Ltd, Beijing, China

• Lead the research and development of DNA fragment analysis software (C++)
• Software architecture design, algorithm research, and core code implementation
• Requirements analysis and prototype development for the market in both China and US
• Major Products: ChimerMarker (automated chimerism analysis), GeneMarker HID (STR Human Identity), GeneMarker (genotype analysis), GeneMarker MTP (multi-template processor), GeneMarker DxTerity (nuclear radiation exposure testing), GeneMarker Melting Curve (thalassemia and tuberculosis resistance testing), GeneMarker Maize (corn breeding testing)
• These products have been used by more than 2,000 top-notch labs worldwide

Research Intern (2007 - 2008), Siemens Corporate Technology, Beijing, China

• Software design, algorithm research and implementation in computer graphics.
• Develop a product: 3D simulation system of steel refrigeration conveyor line.