Publications

Detecting genomic deletions from high-throughput sequence data with unsupervised learning

Xin Li, Yufeng Wu, Scientific Report, Revise and Resubmit, 2019

Detecting circular RNA from high-throughput sequence data with de Bruijn graph

Xin Li, Yufeng Wu, BMC Genomics, Accepted, 2019

CircMarker: a fast and accurate algorithm for circular RNA detection

Xin Li, Chong Chu, Jingwen Pei, Ion Mandoiu, Yufeng Wu, BMC Genomics, 2018

CLADES: A classification-based machine learning method for species delimitation from population genetic data

JW Pei, Chong Chu, Xin Li, Bin Lu, YF Wu, Molecular Ecology Resources, 2018

GAPPadder: a sensitive approach for closing gaps on draft genomes with short sequence reads

Chong Chu, Xin Li and Yufeng Wu, BMC Genomics, 2017

SpliceJumper: a classification-based approach for calling splicing junctions from RNA-seq data

Chong Chu, Xin Li and Yufeng Wu, BMC Bioinformatics, 2017